Publications
Underlined text = lab member
Click bold title to visit the article
2025
Gusareva ES, Ghosh AG, Kharkov VN, Khor S-S...Kalsi N,...Kim HL (2025) From North Asia to South America: Tracing the longest human migration through genomic sequencing. Science, 388: 6748.
Ghosh AG, Kim HL, Khor S-S (2025) HLA alleles and dengue susceptibility across populations in the era of climate change: a comprehensive review. Frontiers in Immunology. 16:1473475.
Khor S-S, Hirayasu K, Kawai Y, Kim HL, Nagasaki M and Tokunaga K (2025) LILR genotype imputation with attribute bagging (LIBAG): leukocyte immunoglobulin-like receptor copy number imputation system. Frontiers in Immunology. 16:1559301.
2023
Kim HL, Li T, Kalsi N, Nguyen HTT, Shaw TA, Ang KC, Cheng KC, et al. (2023). Prehistoric human migration between Sundaland and South Asia was driven by sea-level rise. Communication Biology 6(1), 150.
Lorenzini PA, Gusareva ES, Ghosh AG, Ramli NAB, Preiser PR, Kim HL (2023). Population-specific positive selection on low CR1 expression in malaria-endemic regions. PLOS ONE 18(1), e0280282.
Tiong RHY, Dacanay J, Uchida A, Desai AS, Kalsi N, Tong C, Kim HL (2023). Population genomic analysis reveals high inbreeding in a Hawksbill turtle population nesting in Singapore. bioRxiv, 2023.12.28.573525.
2022
Drautz-Moses DI, Luhung I, Gusareva ES, Kee C, Gaultier NE, et al. (2022). Vertical stratification of the air microbiome in the lower troposphere. Proceedings of the National Academy of Science 119(7), e2117293119.
Cheung R, Jolly S, Vimal M, Kim HL, McGonigle I (2022). Who’s afraid of genetic tests?: An assessment of Singapore’s public attitudes and changes in attitudes after taking a genetic test. BMC Medical Ethics 23(1), 5.
Jiménez-Kaufmann A, Chong AY, Cortés A, Quinto-Cortés CD...Kim HL et al. (2022). Imputation Performance in Latin American Populations: Improving Rare Variants Representation With the Inclusion of Native American Genomes. Frontiers in Genetics 12, 719791.
Gusareva ES, Lorenzini PA, Ramli NAB, Ghosh AG, Kim HL (2022). Population-specific adaptation in malaria-endemic regions of Asia. Journal of Bioinformatics and Computational Biology 19(06), 2140006.
Luhung I, Uchida A, Lim SBY, Gaultier NE, Kee C, Lau KJX, Gusareva ES, ...Kim HL et al. (2021). Experimental parameters defining ultra-low biomass bioaerosol analysis. NPJ Biofilms and Microbiomes 7(1), 37.
2020
Uchida A, Kim HL, Purbojati RW, Vettath VK, Gupta AB, Houghton JNI, et al. (2020). Complete genome of Enterobacter sichuanensis strain SGAir0282 isolated from air in Singapore. Gut Pathogens 12, 1-7.
2019
Wall JD, Ratan A, Stawiski E, Kim HL, Kim C, Gupta R, Suryamohan K, et al. (2019). Identification of African-specific admixture between modern and archaic humans. The American Journal of Human Genetics 105(6), 1254-1261.
GAK consortium (2019). The GenomeAsia 100K Project enables genetic discoveries across Asia. Nature 576(7785), 106–111.
Yoo SK, Kim CU, Kim HL, Kim S, Shin JY, Kim N, Yang JSW, Lo KW, et al. (2019). NARD: whole-genome reference panel of 1779 Northeast Asians improves imputation accuracy of rare and low-frequency variants. Genome Medicine 11, 1-10.
Gusareva ES, Acerbi E, Lau KJX, Luhung I, Premkrishnan BNV,...Kim HL et al. (2019). Microbial communities in the tropical air ecosystem follow a precise diel cycle. Proceedings of the National Academy of Sciences 116(46), 23299-23308.
Carpi G, Kitchen A, Kim HL, Ratan A, Drautz-Moses DI, McGraw JJ, et al. (2016). Mitogenomes reveal diversity of the European Lyme borreliosis vector Ixodes ricinus in Italy. Molecular Phylogenetics and Evolution 101, 194-202.
2016
Kim HL, Ratan A, Perry GH, Montenegro A, Miller W, Schuster SC (2014). Khoisan hunter-gatherers have been the largest population throughout most of modern-human demographic history. Nature Communications 5(1), 5692.